Disease Library

Plant disease & disorder profiles

Showing 30 of 74 profiles: symptoms, spread, host crops, and organic-first treatments.

Fungal

Alternaria leaf spot

Alternaria brassicicola / A. spp.

A close cousin of early blight that specializes in brassicas and other crops, producing dark concentric-ringed spots that can turn a whole head black if left unmanaged.

Hosts
Cabbage, Broccoli, Cauliflower, Kale
Bacterial

Angular leaf spot

Pseudomonas syringae pv. lachrymans

A bacterium that produces angular, vein-bound spots on cucumber and melon leaves, often leaking a sticky ooze that dries into a white crust.

Hosts
Cucumber, Cantaloupe / Melon, Zucchini, Winter squash
Fungal

Anthracnose

Colletotrichum spp.

A group of closely related fungi that cause sunken, water-soaked spots on ripening fruit and dark blotches on leaves and stems. Especially damaging on cucurbits, peppers, beans, and tomatoes right at harvest time.

Hosts
Cucumber, Winter squash, Pumpkin, Pepper
Bacterial

Bacterial soft rot

Pectobacterium spp. (formerly Erwinia carotovora)

An opportunistic bacterium that enters through wounds, bruises, or insect damage and turns fleshy roots, bulbs, and stems into a soft, mushy, foul-smelling mass, often in storage.

Hosts
Potato, Carrot, Onion, Cabbage
Fungal

Bitter rot

Colletotrichum spp.

A warm-weather anthracnose relative that causes sunken, circular brown rot spots on apple fruit, usually arranged in concentric rings of tan-orange spore pustules.

Hosts
Apple, Grape
Fungal

Black rot (grape)

Guignardia bidwellii

A fungal disease specific to grapes that produces reddish-brown leaf spots and then completely mummifies developing berries into hard, black, wrinkled raisins.

Hosts
Grape
Bacterial

Black rot of brassicas

Xanthomonas campestris pv. campestris

A vascular bacterium of cabbage-family crops that enters through leaf edges and water pores, causing distinctive V-shaped yellow wedges that point toward the leaf's blackened veins.

Hosts
Cabbage, Broccoli, Cauliflower, Kale
Abiotic disorder

Blossom end rot

N/A — abiotic (calcium transport disorder)

A localized calcium deficiency at the fruit's blossom end, usually caused by inconsistent watering rather than a lack of calcium in the soil. Uneven moisture disrupts the plant's ability to move calcium into fast-growing fruit tissue.

Hosts
Tomato, Pepper, Zucchini, Winter squash
Fungal

Brown rot

Monilinia fructicola

A fast-moving fungus that blights blossoms in spring and then rots ripening stone fruit into a soft brown mass covered in gray-tan powdery spore tufts, often spreading fruit to fruit where they touch.

Hosts
Peach, Plum, Cherry
Abiotic disorder

Calcium deficiency

N/A — abiotic (nutrient deficiency/transport disorder)

Calcium barely moves within the plant once deposited, so deficiency symptoms show up specifically in the newest growth and fastest-growing tissue, most famously as blossom end rot on fruit.

Hosts
Tomato, Pepper, Cabbage, Lettuce
Fungal

Clubroot

Plasmodiophora brassicae

A soilborne organism (technically a protist, long grouped with fungal diseases) that infects brassica roots and causes grotesque, swollen, club-shaped galls that cripple water and nutrient uptake.

Hosts
Cabbage, Broccoli, Cauliflower, Kale
Abiotic disorder

Fruit cracking

N/A — abiotic (rapid water uptake after drought)

A dry spell followed by heavy rain or watering causes the fruit's interior to swell faster than the skin can stretch, splitting the skin in radial or concentric rings.

Hosts
Tomato, Watermelon, Cantaloupe / Melon, Cabbage
Fungal

Fusarium crown and root rot

Fusarium oxysporum f. sp. radicis-lycopersici (and related formae)

A close relative of Fusarium wilt that attacks the crown and root system rather than moving up the whole vascular system, causing a brown, sunken canker right at the soil line.

Hosts
Tomato, Cucumber, Watermelon
Fungal

Gray mold (Botrytis blight)

Botrytis cinerea

An opportunistic fungus that colonizes dead or dying tissue (old flower petals, bruised fruit, wounds) and then spreads into healthy tissue, producing a fuzzy gray-brown mold coat.

Hosts
Tomato, Strawberry, Grape, Pepper
Fungal

Gummy stem blight

Stagonosporopsis cucurbitacearum

A cucurbit-specific fungus causing leaf spots, stem cankers that ooze amber gum, and a fruit-rotting phase confusingly also called 'black rot' on melons and squash.

Hosts
Cucumber, Winter squash, Pumpkin, Watermelon
Bacterial

Halo blight

Pseudomonas savastanoi pv. phaseolicola

A bean-specific bacterium that produces small angular spots ringed by a wide, pale-green-to-yellow halo, often larger than the spot itself.

Hosts
Bush bean, Pole bean
Oomycete

Late blight

Phytophthora infestans

The water-mold pathogen behind the Irish potato famine. Moves explosively in cool, wet weather, turning whole tomato and potato plantings to black mush within days.

Hosts
Tomato, Potato
Nematode

Lesion nematode

Pratylenchus spp.

A migratory soilborne roundworm that tunnels through roots (rather than settling in one spot like root-knot nematode), leaving dead, discolored lesions that open the door to fungal and bacterial rot organisms.

Hosts
Potato, Carrot, Strawberry, Apple
Oomycete

Phytophthora blight

Phytophthora capsici

A soil- and water-borne mold that causes sudden crown collapse and a fast-spreading fruit rot, especially devastating in low or poorly drained spots after heavy rain.

Hosts
Pepper, Zucchini, Winter squash, Pumpkin
Oomycete

Phytophthora root rot

Phytophthora spp.

A general term for water-mold root rots affecting perennials and fruiting shrubs/trees planted in soil that stays wet, slowly killing the root system from the tips inward.

Hosts
Strawberry, Raspberry, Blueberry, Apple
Viral

Potato virus Y

Potato virus Y (PVY)

An aphid-transmitted virus of potato (and related nightshades) that causes leaf mottling, mosaic patterns, and in some strains a distinctive necrotic ringspot on tubers.

Hosts
Potato, Pepper, Tomato
Oomycete

Pythium damping-off

Pythium spp.

A water mold that attacks seeds and seedlings in cool, wet, poorly drained soil, causing seeds to rot before they emerge or newly emerged seedlings to collapse at the soil line.

Hosts
Tomato, Pepper, Cucumber, Bush bean
Fungal

Rhizoctonia root and crown rot

Rhizoctonia solani

A very common soil fungus that attacks seedlings at the soil line (a major cause of damping off) and, in older plants, causes root/crown rot and — on potato — the black, tar-like 'black scurf' on tubers.

Hosts
Bush bean, Potato, Cabbage, Lettuce
Bacterial

Ring rot of potato

Clavibacter sepedonicus

A quarantine-significant potato bacterium that plugs the vascular ring inside the tuber with a cheesy, cream-colored rot, usually spread from infected seed potatoes rather than the field.

Hosts
Potato
Nematode

Root-knot nematode

Meloidogyne spp.

A microscopic soilborne roundworm that burrows into roots and triggers swollen galls as the plant's cells are hijacked to feed the nematode. Above-ground symptoms mimic drought or nutrient stress, which makes it easy to misdiagnose without pulling a plant.

Hosts
Tomato, Carrot, Cucumber, Pepper
Abiotic disorder

Salt burn

N/A — abiotic (salt toxicity)

Excess soluble salts in the soil, from over-fertilizing, road salt runoff, or naturally saline soil/water, pull moisture out of roots and scorch leaf margins.

Hosts
Lettuce, Bush bean, Carrot, Strawberry
Abiotic disorder

Soil compaction stress

N/A — abiotic (physical root restriction)

Repeated foot traffic, tilling wet soil, or heavy equipment presses soil particles together, squeezing out the pore space roots need to grow and water needs to drain through.

Hosts
Carrot, Potato, Tomato, Bush bean
Fungal

Southern blight

Sclerotium rolfsii

A fast, heat-loving soil fungus that girdles the stem right at the soil line, identifiable by a white fan of fungal threads and mustard-seed-sized round sclerotia at the plant's base.

Hosts
Tomato, Pepper, Bush bean, Watermelon
Abiotic disorder

Tipburn

N/A — abiotic (localized calcium deficiency)

Fast-growing inner leaves of heading crops outpace the plant's ability to deliver calcium to the leaf margin, so the very edge of the leaf dies while the rest stays healthy.

Hosts
Lettuce, Cabbage, Kale
Fungal

White mold (Sclerotinia)

Sclerotinia sclerotiorum

A fungus that infects through dying blossoms, then colonizes stems and pods with a fluffy white cotton-like growth studded with hard black sclerotia the size of mouse droppings.

Hosts
Bush bean, Zucchini, Winter squash, Cabbage

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